Department of Pharmaceutical Chemistry, Priyadarshini JL College of Pharmacy, Nagpur, 440016.
Background: In this study, we used molecular docking to explore the binding affinity, ADME, and toxicity of flavone derivatives on several receptors associated with cardioprotective action. The binding affinity of several flavone derivatives to various receptors involved in cardioprotective action was determined. Auto Dock Vina, PyMol, Discovery Studio, AutoDock Tools, ChemSketch, Swiss ADME, and PROTOX 3.0. Methods: Molecular docking. Results: The binding results of the selected plant compounds and target proteins, namely 1o86, 7Q29, 5JMY, 4DLI, 2YCW, and 1CX2, showed that the good binding affinity and good receptor binding mode selected target. However, among all protein ? 1 adrenergic receptor (ID:- 2YCW) showed lowest binding affinity with compound D10 (2-(4-tert-butylphenyl)-4H-1-benzopyran-4-one) (binding energy – 11.0 Kcal/mol), D44 (binding energy – 10.6 Kcal/mol). D39 (binding energy – 10.4 Kcal/mol), D32, D35 & D42 (binding energy – 10.2 Kcal/mol). Conclusions: The current study attempted to computationally find chemicals that can bind to the numerous targets of cardiovascular disease. The docking scores and interaction analysis indicate that most drugs have the ability to bind to many targets involved in cardiovascular illness. However, the ? 1 adrenergic receptor has a high binding affinity. Absorption, distribution, metabolism, excretion, and toxicity, as well as toxicity prediction, revealed several chemicals that could be employed as possible candidates against cardiovascular disease.
Cardiovascular diseases (CVDs) are the leading cause of death globally.1 Approximately 10 million fatalities occur annually, and the figure will climb to 23.6 million by 2030.2 The leading cause of these deaths is ischemic heart disease (IHD), which claimed over 9 million lives in 2016. IHD remains the leading cause of death in countries of all income levels. Rates vary per country and are declining in the majority of them, indicating a lot of potential for growth. Future progress may be hampered by rising hypertension in some developing countries, as well as global obesity rates.3 IHD has a greater death rate than other CVDs, such as stroke, hypertension, and other cardiovascular illnesses. People who follow a high saturated fatty acid, high dietary energy density, and high sodium diet are substantially more likely to develop coronary heart disease than those who do not. Cardiovascular disorders (CVDs), which include coronary heart disease (CHD), cerebrovascular disease or accident (CVA), peripheral arterial disease, and rheumatic disease, are recognized as the leading cause of death worldwide. Rising trends in CVD prevalence and deaths, particularly CHD, have focused global attention on disease prevention and control.4 Low-middle-income countries, such as Pakistan, India, Bangladesh, Nepal, and Sri Lanka, have a higher risk of coronary heart disease (CHD) than other countries.5 Obesity, physical inactivity, smoking, and hereditary predisposition all contribute to the development of cardiovascular problems.6 Flavone derivatives (2-phenylchromone) are naturally occurring heterocyclic compounds belonging to the flavonoid category7. They are abundant in many naturally occurring products and represent a significant group of oxygen heterocycles, which are widely distributed in the plant kingdom as secondary metabolites8. Flavonoids are a broad category of around 4000 polyphenolic chemicals found in plant-derived foods. The fundamental basis for systematic classification of these compounds is the saturation level and aperture of the major pyran ring, which results in the synthesis of flavones, flavanols, flavonols, isoflavones, and flavanonols9. Molecular docking is an important approach for understanding flavone derivatives' cardioprotective effect since it offers insight on their binding interactions with specific biological targets10. This computational method enables researchers to predict the affinity and orientation of flavonoids when they interact with proteins crucial in cardiovascular health, allowing the identification of novel therapeutic agents. This knowledge contributes in the development of treatment methods for cardiovascular disorders by improving flavone derivatives' cardioprotective properties.11 These interactions frequently entail the creation of hydrogen bonds and hydrophobic contacts, which are critical for the stability of the enzyme-ligand complex and improve the cardioprotective properties of these molecules12. We used molecular docking methods to investigate the interaction between flavones and cardiovascular targets. As a result, we conducted an in silico, ADME, toxicity analysis docking investigation of cardiovascular disease targets using flavones derivatives.
2. MATERIALS AND METHODS
2.1 Platform for molecular docking
The docking study of all the flavone derivatives selected as ligand and with target proteins was perform using AutoDock Vina software13.
2.2 Ligand preparation
UCSF chimera software retrieves the 3D structure of all compounds from the PubChem database10 (https://pubchem.ncbi.nlm.nih.gov/). The Gasteiger charges and rotatable bonds were then allocated to the PDB ligands by Auto Dock Tool 1.5.611. The compound structures were evaluated for docking studies after minimizing their energy. (Table 1).
2.3 Protein preparation
Based on a review of the literature, a total of six proteins linked to various cardiovascular conditions were chosen (Table 2). The RCSB protein data bank (http://www.pdb.org) provided the 3D structures of a few chosen target proteins. Co-crystallized ligands (X-ray ligands) were present in the binding site of every protein. Each protein structure's ligands were extracted from the binding site and stored in a different file. Using the docking program AutoDock Vina, automated molecular docking was carried out to determine molecular interaction and optimum geometry14.
2.4 ADMET and toxicity prediction
The absorption, distribution, metabolism, excretion, and toxicity (ADMET) screening of ligands contributes in determining their absorption properties, toxicity, and drug-like nature. Ligand compounds were saved in smiles format and specific drugs were submitted to SWISSADME. SWISSADME is a web-based tool for predicting ADME and pharmacokinetic features of molecules. The anticipated outcome includes lipophilicity, water solubility, physicochemical characteristics, pharmacokinetics, drug-likeness, medicinal chemistry, and brain or intestinal estimated15. Toxicity classes include Category I (compounds with LD50 values ≤50 mg/kg), Category II (compounds with LD50 values >50 mg/kg), and Category III (somewhat toxic) (compounds with LD50 values 500-5000 mg/kg), which are included in Category IV16,17. PROTOX is a rodent oral toxicity server that predicts the LD50 value and toxicity class of the query substance18.
2.5 Drug likeness calculations
Drug scans were conducted to establish whether the compounds fitted the drug-likeness criteria. Lipinski's filters were used with Molinspiration (http://www.molinspiration.com) to examine drug likeness attributes such as the number of hydrogen acceptors (no more than 10), the number of hydrogen donors (no more than 5), the molecular weight (more than 500 daltons), and the partition coefficient log P (no less than 5). The smiles format for each compounds was uploaded for examination.
Table 1: Major flavone derivatives for docking studies.
Sr no. |
IUPAC NAME |
Molecular Formula |
PubChem ID |
D1 |
2-(3-nitrophenyl)-4H-1-benzopyran-4-one |
C15H9NO4 |
|
D2 |
2-(3-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O3 |
|
D3 |
2-(4-methylphenyl)-4H-1-benzopyran-4-one |
C16H12O2 |
|
D4 |
2-(4-methoxyphenyl)-4H-1-benzopyran-4-one |
C16H12O3 |
|
D5 |
2-(4-bromophenyl)-4H-1-benzopyran-4-one |
C15H9BrO2 |
|
D6 |
2-(4-aminophenyl)-4H-1-benzopyran-4-one |
C15H11NO2 |
|
D7 |
2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O3 |
|
D8 |
2-(2-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O3 |
|
D9 |
2-(3-aminophenyl)-4H-1-benzopyran-4-one |
C15H11NO2 |
|
D10 |
2-(4-tert-butylphenyl)-4H-1-benzopyran-4-one |
C19H18O2 |
|
D11 |
2-(3-bromophenyl)-4H-1-benzopyran-4-one |
C15H9BrO2 |
|
D12 |
4-(4-oxo-4H-1-benzopyran-2-yl) benzoic acid |
C16H10O4 |
|
D13 |
2-[3,6-(di-propan-2-yl)4-hydroxy-phenyl]-4H-1-benzopyran-4-one |
C23H26Os |
|
D14 |
2-(3,4,5-trimethoxyphenyl)-4H-1-benzopyran-4-one |
C18H16O5 |
|
D15 |
6-tert-butyl-2-phenyl-4H-1-benzopyran-4-one |
C19H18O2 |
|
D16 |
2-(4-chlorophenyl)-4H-1-benzopyran-4-one |
C15H9ClO2 |
|
D17 |
2-(3,4-dimethoxyphenyl)-4H-1-benzopyran-4-one |
C17H14O4 |
|
D18 |
2-(4-fluorophenyl)-4H-1-benzopyran-4-one |
C15H9FO2 |
|
D19 |
6-fluoro-2-phenyl-4H-1-benzopyran-4-one |
C15H9FO2 |
|
D20 |
6-chloro-2-phenyl-4H-1-benzopyran-4-one |
C15H9ClO2 |
|
D21 |
6-methyl-2-phenyl-4H-1-benzopyran-4-one |
C16H12O2 |
|
D22 |
5-hydroxy-2-(3,4,5-trimethoxyphenyl)-4H-1-benzopyran-4-one |
C18H16O6 |
|
D23 |
2-(3,4-dimethoxyphenyl)-5-hydroxy-4H-1-benzopyran-4-one |
C17H14O5 |
|
D24 |
2-(4-chlorophenyl)-5-hydroxy-4H-1-benzopyran-4-one |
C15H9ClO3 |
|
D25 |
2-(4-iodophenyl)-4H-1-benzopyran-4-one |
C15H9IO2 |
|
D26 |
2-(2-fluorophenyl)-4H-1-benzopyran-4-one |
C15H9FO2 |
|
D27 |
2-(4-nitrophenyl)-4H-1-benzopyran-4-one |
C15H9NO4 |
|
D28 |
2-(2-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O3 |
|
D29 |
2-(2-methylphenyl)-4H-1-benzopyran-4-one |
C16H12O2 |
|
D30 |
2-(2-nitrophenyl)-4H-1-benzopyran-4-one |
C15H9NO4 |
|
D31 |
2-(2-ethylphenyl)-4H-1-benzopyran-4-one |
C17H14O2 |
|
D32 |
2-[3-(propan-2-yl) phenyl]-4H-1-benzopyran-4-one |
C18H16O2 |
|
D33 |
2-(2-aminophenyl)-4H-1-benzopyran-4-one |
C15H11NO2 |
|
D34 |
5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O4 |
|
D35 |
5-hydroxy-2-(2-methylphenyl)-4H-1-benzopyran-4-one |
C16H12O3 |
|
D36 |
5-hydroxy-2-(4-methoxyphenyl)-4H-1-benzopyran-4-one |
C16H12O4
|
|
D37 |
5-hydroxy-2-(4-nitrophenyl)-4H-1-benzopyran-4-one |
C15H9NO5 |
|
D38 |
5-hydroxy-2-(3,4,5-trimethoxyphenyl)-4H-1-benzopyran-4-one |
C18H16O6 |
|
D39 |
2-(2-ethylphenyl)-5-hydroxy-4H-1-benzopyran-4-one |
C17H14O3 |
|
D40 |
6-chloro-2-(4-methoxyphenyl)-4H-1-benzopyran-4-one |
C16H11ClO3 |
|
D41 |
6-chloro-2-(4-nitrophenyl)-4H-1-benzopyran-4-one |
C15H8ClNO4 |
|
D42 |
5-hydroxy-2-(4-methylphenyl)-4H-1-benzopyran-4-one |
C16H12O3 |
|
D43 |
5-hydroxy-2-(2-hydroxyphenyl)-4H-1-benzopyran-4-one |
C15H10O4 |
|
D44 |
5-hydroxy-2-[3-(propan-2-yl) phenyl]-4H-1-benzopyran-4-one |
C18H16O3 |
|
D45 |
2-(4-aminophenyl)-5-hydroxy-4H-1-benzopyran-4-one |
C15H11NO3 |
|
D46 |
2-(4-aminophenyl)-6-chloro-4H-1-benzopyran-4-one |
C15H10ClNO2 |
|
D47 |
6-chloro-2-[3-(propan-2-yl) phenyl]-4H-1-benzopyran-4-one |
C18H15ClO2 |
|
D48 |
2-(2-bromophenyl)-6-chloro-4H-1-benzopyran-4-one |
C15H8BrClO2 |
|
D49 |
6-chloro-2-(2-methoxyphenyl)-4H-1-benzopyran-4-one |
C16H11ClO3 |
|
D50 |
6-chloro-2-(2-chlorophenyl)-4H-1-benzopyran-4-one |
C15H8Cl2O2 |
Table 2: Targeted receptor proteins associated with cardiovascular disease Results
Sr no. |
Target Proteins |
Disease |
PDB ID |
1 |
Angiotensin-converting enzyme |
Atherosclerosis/coronary artery diseases |
1o86 |
2 |
ACE/NEP inhibitor |
Atherosclerosis/coronary artery diseases |
7Q29 |
3 |
MAPK |
Myocardial infarction |
4DLI |
4 |
Neprilysin |
Coronary artery disease |
5JMY |
5 |
β?1?adrenergic receptor |
Chronic heart failure |
2YCW |
6 |
Cox-2 |
Myocardial infarction, pain |
1CX2 |
Docking results
The binding results of the selected compounds and target proteins, namely 1o86, 7Q29, 5JMY, 4DLI, 2YCW, and 1CX2, revealed that the good binding affinity and receptor binding mode selected target. However, among all derivatives, D10 (2-(4-tert-butylphenyl)-4H-1-benzopyran-4-one) has the lowest binding energy with β?1?adrenergic receptor (binding energy – 11.0 Kcal/mol), D47 with ACE and neutral endopeptidase inhibitors (binding energy – 9.4 Kcal/mol), D47 with ACE has lowest binding energy (binding energy – 9.2 Kcal/mol), for cox-2 the lowest binding energy with D47 derivative (binding energy – 10.5 Kcal/mol), D32 has lowest binding energy with receptor MAPK (binding energy – 10.4 Kcal/mol), D11 has lowest binding energy with protein neprilysin (binding energy – 9.4 Kcal/mol). All binding affinities of flavone derivatives are shown in Table 3.
Table 3: Binding energy of flavone derivatives against targeted protein receptors
Derivative code |
Cox-2 (1CX2)
|
ACE/NEP, ID – 7Q29
|
ACE (1o86)
|
β?1?adrenergic receptor ID:- 2YCW |
MAPK ID:- 4DLI
|
Neprilysin ID:- 5JMY |
D1 |
-9.4 |
-9.1 |
-8.4 |
-9.8 |
-8.5 |
-8.3 |
D2 |
-8.9 |
-8.8 |
-8.3 |
-9.6 |
-9.9 |
-9.0 |
D3 |
-10 |
-9.0 |
-8.3 |
-10.0 |
-8.6 |
-7.9 |
D4 |
-8.9 |
-8.5 |
-8.2 |
-9.4 |
-9.2 |
-8.0 |
D5 |
-9.1 |
-8.9 |
-8.1 |
-9.7 |
-8.7 |
-7.8 |
D6 |
-9.3 |
-8.5 |
-8.1 |
-9.6 |
-9.1 |
-7.7 |
D7 |
-9.6 |
-8.5 |
-8.0 |
-9.7 |
-9.2 |
-8.1 |
D8 |
-8.9 |
-8.5 |
-8.2 |
-9.3 |
-9.7 |
-8.9 |
D9 |
-9.0 |
-8.8 |
-8.3 |
-9.6 |
-9.6 |
-9.0 |
D10 |
-9.8 |
-8.9 |
-8.5 |
-11.0 |
-8.7 |
-8.3 |
D11 |
-9.4 |
-8.7 |
-8.1 |
-9.6 |
-9.6 |
-9.4 |
D12 |
-9.2 |
-8.5 |
-8.8 |
-9.9 |
-9.1 |
-8.5 |
D13 |
-9.3 |
-9.0 |
-8.5 |
-8.8 |
-9.2 |
-8.2 |
D14 |
-8.8 |
-8.5 |
-7.9 |
-9.0 |
-8.1 |
-7.5 |
D15 |
-9.4 |
-9.0 |
-8.2 |
-10 |
-9.1 |
-8.1 |
D16 |
9.0 |
-8.8 |
-8.1 |
-9.7 |
-9.1 |
-7.8 |
D17 |
-8.9 |
-8.6 |
-8.0 |
-9.3 |
-9.0 |
-8.3 |
D18 |
-9.0 |
-8.7 |
-8.0 |
-9.6 |
-9.6 |
-8.8 |
D19 |
-8.2 |
-8.4 |
-8.0 |
-9.3 |
-9.3 |
-8.0 |
D20 |
-8.7 |
-8.3 |
-7.8 |
-9.4 |
-8.2 |
-8.0 |
D21 |
-10.3 |
-8.4 |
-8.0 |
-9.7 |
-8.2 |
-8.8 |
D22 |
-9.2 |
-8.3 |
-8.1 |
-8.8 |
-7.6 |
-8.6 |
D23 |
-9.1 |
-8.2 |
-8.4 |
-9.7 |
-7.7 |
-7.8 |
D24 |
-8.9 |
-8.5 |
-8.2 |
-10.0 |
-9.6 |
-7.7 |
D25 |
-8.9 |
-8.9 |
-7.8 |
-9.7 |
-8.5 |
-7.8 |
D26 |
-9.1 |
-8.8 |
-7.7 |
-9.6 |
-9.6 |
-8.3 |
D27 |
-9.1 |
-8.9 |
-8.7 |
-9.8 |
-8.2 |
-8.3 |
D28 |
-8.9 |
-8.5 |
-8.2 |
-9.3 |
-9.7 |
-8.9 |
D29 |
-8.5 |
-8.9 |
-8.4 |
-9.8 |
-9.8 |
-7.5 |
D30 |
-8.7 |
-7.9 |
-8.1 |
-9.8 |
-9.6 |
-7.5 |
D31 |
-8.3 |
-8.9 |
-7.7 |
-10.1 |
-10.0 |
-7.5 |
D32 |
-9.0 |
-9.3 |
-9.0 |
-10.3 |
-10.4 |
-8.1 |
D33 |
-9.4 |
-8.6 |
-8.0 |
-9.3 |
-9.2 |
-8.6 |
D34 |
-8.7 |
-8.2 |
-8.1 |
-9.7 |
-9.6 |
-8.3 |
D35 |
-9.2 |
-8.6 |
-8.1 |
-10.3 |
-10.1 |
-7.4 |
D36 |
-9.0 |
-8.1 |
-8.3 |
-9.8 |
-9.7 |
-7.9 |
D37 |
-9.4 |
-8.8 |
-8.6 |
-10.2 |
-9.3 |
-8.0 |
D38 |
-9.1 |
-8.3 |
-8.1 |
-8.8 |
-9.3 |
-8.6 |
D39 |
-9.1 |
-8.6 |
-8.3 |
-10.4 |
-8.0 |
-9.1 |
D40 |
-8.6 |
-8.2 |
-7.9 |
-9.0 |
-8.4 |
-7.2 |
D41 |
-9.2 |
-9.0 |
-8.5 |
-8.6 |
-7.6 |
-7.9 |
D42 |
-9.0 |
-8.6 |
-8.3 |
-10.3 |
-9.6 |
-8.1 |
D43 |
-8.9 |
-8.2 |
-8.1 |
-9.6 |
-10.1 |
-8.8 |
D44 |
-9.8 |
-9.2 |
-8.7 |
-10.6 |
-10.3 |
-8.4 |
D45 |
-8.8 |
-8.2 |
-8.0 |
-9.7 |
-9.5 |
-7.9 |
D46 |
-9.0 |
-8.2 |
-8.0 |
-8.6 |
-8.3 |
-7.4 |
D47 |
-10.5 |
-9.4 |
-9.2 |
-10.0 |
-8.5 |
-8.5 |
D48 |
-8.0 |
-8.4 |
-7.7 |
-9.0 |
-7.9 |
-8.0 |
D49 |
-9.3 |
-8.3 |
-7.9 |
-8.8 |
-7.3 |
-7.7 |
D50 |
-8.8 |
-8.2 |
-8.2 |
-8.8 |
-8.9 |
-8.0 |
Rofecoxib |
-8.1 |
|
|
|
|
|
Omapatrilat |
|
-9.6 |
|
|
|
|
Lisinopril |
|
|
-7.6 |
|
|
|
Carazolol |
|
|
|
-9.6 |
|
|
losmapimod |
|
|
|
|
-8.7 |
|
Figure1: COX?2 receptor docked with D47
Figure 3: ACE receptor docked with D47
Figure 4: β?1?adrenergic receptor docked with D10
Figure 5: MAPK receptor docked with D37
Figure 6: Neprilysin receptor docked with D11
Toxicity and ADMET prediction
The toxicity of compounds was evaluated using the Protox 3.0 software. The server admet generates pharmacokinetic characteristics of substances using various criteria: Absorption, distribution, metabolism, and excretion19. The results of admet analysis and toxicity prediction have been shown in table 4. Except for D1 (600 mg/kg), all examined compounds had greater LD50 values, indicating that they are non-toxic. Except for D6, D9, D27, D30, D33, D45, and D46, all of the chemicals chosen have no hepatotoxic properties. Except for D2, D3, D7, D21, D24, D32, D42, and D44, all of the derivatives have no cardiotoxic activity. As a result, based on ADMET and toxicity analysis, some derivatives meet all of the mentioned requirements, and we may indicate that they are prospective candidates for the development of a better cardiovascular disease treatment.
Drug-likeness prediction
The Drug-likeness filters help in the early preclinical development by avoiding costly late step preclinical and clinical failure. The drug-likeness properties of molecules were analyzed based on Lipinski rule of 5(Table 5). All the selected compounds satisfied Lipinski’s rule of five.
Table 4: ADMET prediction of selected derivatives used through swiss ADME and Protox-3.0 software
Compounds |
LD50, (mg/kg) |
Hepatotoxicity |
Cardiotoxicity |
Cytotoxicity |
Carcinogens |
D1 |
600 (class 4) |
inactive |
inactive |
inactive |
inactive |
D2 |
4000 (class 5) |
inactive |
active |
active |
active |
D3 |
2500 (class 5) |
inactive |
active |
active |
active |
D4 |
4000 (class 5) |
inactive |
inactive |
active |
active |
D5 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D6 |
2500 (class 5) |
active |
inactive |
inactive |
active |
D7 |
2500 (class 5) |
inactive |
active |
active |
active |
D8 |
4000 (class 5) |
inactive |
inactive |
inactive |
active |
D9 |
2500 (class 5) |
active |
inactive |
inactive |
active |
D10 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D11 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D12 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D13 |
2500 (class 5) |
inactive |
inactive |
inactive |
inactive |
D14 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D15 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D16 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D17 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D18 |
2500 (class 5) |
inactive |
inactive |
active |
inactive |
D19 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D20 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D21 |
2500 (class 5) |
inactive |
active |
active |
active |
D22 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D23 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D24 |
4000 (class 5) |
inactive |
active |
active |
active |
D25 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D26 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D27 |
2500 (class 5) |
active |
inactive |
inactive |
active |
D28 |
4000 (class 5) |
inactive |
inactive |
inactive |
active |
D29 |
2500 (class 5) |
inactive |
inactive |
active |
active |
D30 |
2500 (class 5) |
active |
inactive |
active |
active |
D31 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D32 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D33 |
2500 (class 5) |
active |
inactive |
inactive |
active |
D34 |
2500 (class 5) |
inactive |
inactive |
inactive |
inactive |
D35 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D36 |
4000 (class 5) |
inactive |
inactive |
inactive |
active |
D37 |
4000 (class 5) |
active |
inactive |
inactive |
active |
D38 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D39 |
4000 (class 5) |
inactive |
inactive |
inactive |
inactive |
D40 |
4000 (class 5) |
inactive |
inactive |
active |
active |
D41 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D42 |
4000 (class 5) |
inactive |
active |
inactive |
active |
D43 |
2500 (class 5) |
inactive |
inactive |
inactive |
inactive |
D44 |
4000 (class 5) |
inactive |
active |
active |
inactive |
D45 |
4000 (class 5) |
active |
inactive |
inactive |
active |
D46 |
2500 (class 5) |
active |
inactive |
inactive |
active |
D47 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D48 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
D49 |
4000 (class 5) |
inactive |
inactive |
inactive |
active |
D50 |
2500 (class 5) |
inactive |
inactive |
inactive |
active |
Table 5: Drug-likeness prediction of selected compounds.
|
Molecular Formula |
Molecular weight |
Log p |
TPSA |
H-bond donar |
H-bond accepter |
Lipinski rule |
D1 |
C15H9NO4 |
267.24 g/mol |
2.56 |
76.03 Ų |
0 |
4 |
Yes |
D2 |
C15H10O3 |
238.24 g/mol |
2.75 |
50.44 Ų |
1 |
3 |
Yes |
D3 |
C16H12O2 |
236.27 g/mol |
3.50 |
30.21 Ų |
0 |
2 |
Yes |
D4 |
C16H12O3 |
252.26 g/mo |
3.15 |
39.44 Ų |
0 |
3 |
Yes |
D5 |
C15H9BrO2 |
301.13 g/mol |
3.80 |
30.21 Ų |
0 |
1 |
Yes |
D6 |
C15H11NO2 |
237.25 g/mol |
2.61 |
56.23 Ų |
1 |
2 |
Yes |
D7 |
C15H10O3 |
238.24 g/mol |
2.75 |
50.44 Ų |
1 |
3 |
Yes |
D8 |
C15H10O3 |
238.24 g/mol |
2.78 |
50.44 Ų |
1 |
3 |
Yes |
D9 |
C15H11NO2 |
237.25 g/mol |
2.61 |
56.23 Ų |
1 |
2 |
Yes |
D10 |
C19H18O2 |
278.35 g/mol |
4.38 |
30.21 Ų |
0 |
2 |
Yes |
D11 |
C15H9BrO2 |
301.13 g/mol |
3.80 |
30.21 Ų |
0 |
2 |
Yes |
D12 |
C16H10O4 |
266.25 g/mol |
2.64 |
67.51 Ų |
1 |
4 |
Yes |
D13 |
C23H26Os |
350.45 g/mol |
4.19 |
50.44 Ų |
1 |
3 |
Yes |
D14 |
C18H16O5 |
312.32 g/mol |
3.12 |
57.90 Ų |
0 |
5 |
Yes |
D15 |
C19H18O2 |
278.35 g/mol |
4.38 |
30.21 Ų |
0 |
2 |
Yes |
D16 |
C15H9ClO2 |
256.68 g/mol |
3.71 |
30.21 Ų |
0 |
2 |
Yes |
D17 |
C17H14O4 |
282.29 g/mol |
3.13 |
48.67 Ų |
0 |
4 |
Yes |
D18 |
C15H9FO2 |
240.23 g/mol |
3.48 |
30.21 Ų |
0 |
3 |
Yes |
D19 |
C15H9FO2 |
240.23 g/mol |
3.56 |
30.21 Ų |
0 |
3 |
Yes |
D20 |
C15H9ClO2 |
256.68 g/mol |
3.78 |
30.21 Ų |
0 |
2 |
Yes |
D21 |
C16H12O2 |
236.27 g/mol |
3.51 |
30.21 Ų |
0 |
2 |
Yes |
D22 |
C18H16O6 |
328.32 g/mol |
3.00 |
78.13 Ų |
1 |
6 |
Yes |
D23 |
C17H14O5 |
298.29 g/mol |
2.95 |
68.90 Ų |
1 |
5 |
Yes |
D24 |
C15H9ClO3 |
272.68 g/mol |
3.59 |
50.44 Ų |
1 |
3 |
Yes |
D25 |
C15H9IO2 |
348.14 g/mol |
3.84 |
30.21 Ų |
0 |
2 |
Yes |
D26 |
C15H9FO2 |
240.23 g/mol |
3.49 |
30.21 Ų |
0 |
3 |
Yes |
D27 |
C15H9NO4 |
267.24 g/mol |
2.55 |
76.03 Ų |
0 |
4 |
Yes |
D28 |
C15H10O3 |
238.24 g/mol |
2.78 |
50.44 Ų |
1 |
3 |
Yes |
D29 |
C16H12O2 |
236.27 g/mol |
3.51 |
30.21 Ų |
0 |
2 |
Yes |
D30 |
C15H9NO4 |
267.24 g/mol |
2.54 |
76.03 Ų |
0 |
4 |
Yes |
D31 |
C17H14O2 |
250.29 g/mol |
3.79 |
30.21 Ų |
0 |
2 |
Yes |
D32 |
C18H16O2 |
264.32 g/mol |
4.11 |
30.21 Ų |
0 |
2 |
Yes |
D33 |
C15H11NO2 |
237.25 g/mol |
2.63 |
56.23 Ų |
1 |
2 |
Yes |
D34 |
C15H10O4 |
254.24 g/mol |
2.64 |
70.67 Ų |
2 |
4 |
Yes |
D35 |
C16H12O3 |
252.26 g/mol |
3.36 |
50.44 Ų |
1 |
3 |
Yes |
D36 |
C16H12O4 |
268.26 g/mol |
3.04 |
59.67 Ų |
1 |
4 |
Yes |
D37 |
C15H9NO5 |
283.24 g/mol |
2.44 |
96.26 Ų |
1 |
5 |
Yes |
D38 |
C18H16O6 |
328.32 g/mol |
3.00 |
78.13 Ų |
1 |
6 |
Yes |
D39 |
C17H14O3 |
266.29 g/mol |
3.66 |
50.44 Ų |
1 |
3 |
Yes |
D40 |
C16H11ClO3 |
286.71 g/mol |
3.68 |
39.44 Ų |
0 |
3 |
Yes |
D41 |
C15H8ClNO4 |
301.68 g/mol |
3.07 |
76.03 Ų |
0 |
4 |
Yes |
D42 |
C16H12O3 |
252.26 g/mol |
3.38 |
50.44 Ų |
1 |
3 |
Yes |
D43 |
C15H10O4 |
254.24 g/mol |
2.67 |
70.67 Ų |
2 |
4 |
Yes |
D44 |
C18H16O3 |
280.32 g/mol |
3.99 |
50.44 Ų |
1 |
3 |
Yes |
D45 |
C15H11NO3 |
253.25 g/mol |
2.50 |
76.46 Ų |
2 |
3 |
Yes |
D46 |
C15H10ClNO2 |
271.70 g/mol |
3.14 |
56.23 Ų |
1 |
2 |
Yes |
D47 |
C18H15ClO2 |
298.76 g/mol |
4.72 |
30.21 Ų |
0 |
2 |
Yes |
D48 |
C15H8BrClO2 |
335.58 g/mol |
4.39 |
30.21 Ų |
0 |
2 |
Yes |
D49 |
C16H11ClO3 |
286.71 g/mol |
3.76 |
39.44 Ų |
0 |
3 |
Yes |
D50 |
C15H8Cl2O2 |
291.13 g/mol |
4.31 |
30.21 Ų |
0 |
2 |
Yes |
DISCUSSION
In pharmaceutical research, computational strategies are of tremendous significance since they help in the identification and development of novel promising molecules, notably using molecular docking approaches20, 21The angiotensin-converting enzyme (ACE) plays an important role in blood pressure regulation, and inhibiting ACE using inhibitory peptides is thought to be a main target for hypertension prevention. Several research employed the docking technique to block the expression of the ACE protein with drugs22. Among all derivatives, D10 (2-(4-tert-butylphenyl)-4H-1-benzopyran-4-one) has the lowest binding energy with β 1 adrenergic receptor (binding energy – 11.0 Kcal/mol), D47 with ACE and neutral endopeptidase inhibitors (binding energy – 9.4 Kcal/mol), D47 with ACE has lowest binding energy (binding energy – 9.2 Kcal/mol), for cox-2 the lowest binding energy with D47 derivative (binding energy – 10.5 Kcal/mol), D32 has lowest binding energy with receptor MAPK (binding energy – 10.4 Kcal/mol), D11 has lowest binding energy with protein neprilysin (binding energy – 9.4 Kcal/mol). In the present study, we have selected 50 flavone derivatives which are synthesize from benzaldehyde and acetophenone derivatives against protein targets of various cardiovascular disease. It was found that among all selected above derivatives satisfy all parameters of ADMET and toxicity, also showed good affinity with selected protein targets, therefore, they could be used as potential broad -spectrum candidate for treatment of different heart problems.
CONCLUSIONS
The current study attempted to computationally find chemicals that can bind to the numerous targets of cardiovascular disease. The docking scores and interactions of the compounds indicate that the majority of the compounds can bind to several targets involved in cardiovascular disease. ADMET and toxicity prediction revealed that derivatives D10, D11, D32, and D47 could be employed as possible cardiovascular disease treatments.
ACKNOWLEDGEMENT
Authors would like to acknowledge Priyadarshini JL College of Pharmacy, Nagpur, for providing research facilities
REFERENCES
Sneha Nandeshwar*, Sapan Shah, Rida Saiyad, Nikita Gaikwad, Pooja Wankhade, In-Silico Evaluation of Flavone Derivatives for Cardioprotective Effects: A Comparative Molecular Docking Approach, Int. J. of Pharm. Sci., 2025, Vol 3, Issue 3, 2543-2556 https://doi.org/10.5281/zenodo.15087478